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Urine Microbiology and Microscopy
Short Description : Urine Microbiology


Urine
Test performed by: LabPLUS Microbiology


Specimen Collection

Specimen notes

Urine microscopy and culture should be justified by clinical particulars.

Early morning midstream urines are preferred. Allowing urine to remain in bladder overnight or at least 4 hours will decrease false negative results.

Record time of collection accurately and ensure immediate dispatch as unrefrigerated specimens more than 2 hours old are unsuitable. Urine specimens that have been at room temperature for longer than 2 hours risk being overgrown with contaminating bacteria, as well as potential pathogens. Do not freeze specimen.

Minimum volume of urine required for testing >3mLs.

Midstream urines

Thoroughly prepare patient to avoid contamination.

Click here to view patient collection instructions .

Catheter urines

Refer "Catheterisation Policy" in Ward Nursing Manual.

Paediatric patients

0 - 1 year: Suprapubic aspiration (bladder stab) is the preferred specimen for culture. Paediatric bag urines are unreliable and extreme care is needed with the interpretation of results.

Over 1 year: Midstream specimens are satisfactory for culture.

Rejection criteria


Sterile Container

Sterile Container Urine
Turnaround Time: At least 1 day

Urgent microscopy result available within 1 hour.

An interim or final culture report issued within 36 hours.

Mycology: an interim report is issued on any positive culture. Negative reports are issued after 7 days.

Trial urines

Turn around time for trial urines defined from time of receipt in Microbiology.

Dipstick/Microscopy within 2-4 hrs of receipt.

Culture within 36-48 hours


Assay Method

Microscopy method is the SIEMENS Atellica UAS800


Diagnostic Use and Interpretation

Urines with a white cell count of <50x10(6)L by microscopy will no longer have a culture performed. This is indicated by a comment on the report.


The only exceptions will be if the specimen falls under one of the following culture exemption categories below.


Exempt Wards that always require culture
Motutapu
Day Stay Haematology (DSH)
27B
PICU
NICU
DCCM 82 / HDU
Cardiothoracic ICU


Exempt Specimen types that always require culture
Nephrostomy
Bladder stab / Supra-Pubic Aspirate
CED In-Out Catheter
Renal Transplant
Fastidious Organism Requests
Sterile Pyuria

Other exceptions
Has been discussed with Microbiologist/Microbiology registrar. Please include details on the request form.


Contact Information

For further information, contact the Microbiology Department via Lablink or the Clinical Microbiologist:

Lablink contact details

Dr Sally Roberts , Microbiologist: ext 22705 Cellphone 021 674 140
Dr Sharmini Muttaiyah
, Microbiologist: ext 22700 Cellphone 021 615 892
Dr Mary de Almeida , Microbiologist: ext 22700 Cellphone 021 170 9117

Dr Matthew Blakiston , Microbiologist: contact via Lablink


Result Details

Reference ranges for urinalysis

Click here to view reference ranges for urine microscopy and dipstick.



Last updated at 13:05:15 04/12/2025